BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033A11LP1|AL429675
(803 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1788 1522 0.0
>3x_Contig1788
Length = 28493
Score = 1522 bits (762), Expect = 0.0
Identities = 790/802 (98%), Gaps = 2/802 (0%)
Strand = Plus / Plus
Query: 1 gatcccttcaatgaaatacctctcttgtgccagataacattgtcaactcttgctatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25011 gatcccttcaatgaaatacctctcttgtgccagataacattgtcaactcttgctatttta 25070
Query: 61 atgtaatccattcggtgttcgtcttctcagaaggatatggcgtgctgttgtgtgagatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25071 atgtaatccattcggtgttcgtcttctcagaaggatatggcgtgctgttgtgtgagatat 25130
Query: 121 ggtaccgataatgttgataaatagtgagttaggaagatattaatgggatggtaggaggga 180
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 25131 ggtaccgataatgttgataaatagtgagtaaggaagatat-aatgggatggtaggaggga 25189
Query: 181 aacaaaaaaaaaaatttctaaatagaaccctatcttaaactgctcatcaagcgtgcctta 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25190 aacaaaaaaaaaaatt-ctaaatagaaccctatcttaaactgctcatcaagcgtgcctta 25248
Query: 241 ttgattcgtagtgcagtttagtctcactgcaccgagttgttcactgtttattccttaccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25249 ttgattcgtagtgcagtttagtctcactgcaccgagttgttcactgtttattccttaccg 25308
Query: 301 ctggttggtttgtwttctgttgattgtaattcaaactttattactctttctcagcatctg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25309 ctggttggtttgtattctgttgattgtaattcaaactttattactctttctcagcatctg 25368
Query: 361 tttataaaattggkgtctcctccgaaacgaagataagatcccttaatcgaaaagtaaaag 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25369 tttataaaattggtgtctcctccgaaacgaagataagatcccttaatcgaaaagtaaaag 25428
Query: 421 acgacggtctgwtcatgaacaggattgatgccgaagacatagtctttggcgcactatcta 480
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25429 acgacggtctgatcatgaacaggattgatgccgaagacatagtctttggcgcactatcta 25488
Query: 481 gatagtgtttttaagcaagtaaaagtattgacgttaaacaacatatatawtttatccagt 540
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 25489 gatagtgtttttaagcaagtaaaagtattgacgttaaacaacatatataatttatccagt 25548
Query: 541 agtagagaagaagatgatatataaaagtaaaaatagggagaacagagaaattgaaccaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25549 agtagagaagaagatgatatataaaagtaaaaatagggagaacagagaaattgaaccaac 25608
Query: 601 cattcacagttaaagggtatcacagatagccaatgggtgattcaaacktttattttawtt 660
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||
Sbjct: 25609 cattcacagttaaagggtatcacagatagccaatgggtgattcaaacgtttatgttaatt 25668
Query: 661 gagaattgaaaktttaagtgacaaaaatagagactaacagtgtatatgttcttttawttt 720
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 25669 gagaattgaaagtttaagtgacaaaaatagagactaacagtgtatatgttcttttaattt 25728
Query: 721 taaagcccattcccaaattctcataccaatttttcgagacattagaagaaaaccgtgtag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25729 taaagcccattcccaaattctcataccaatttttcgagacattagaagaaaaccgtgtag 25788
Query: 781 atattagcatgataacaagttg 802
||||||||||||||||||||||
Sbjct: 25789 atattagcatgataacaagttg 25810
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.32
Gapped
Lambda K H
1.38 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 10,985
Number of Sequences: 1807
Number of extensions: 10985
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 803
length of database: 10,358,551
effective HSP length: 16
effective length of query: 787
effective length of database: 10,329,639
effective search space: 8129425893
effective search space used: 8129425893
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.3 bits)